Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.68□□□□□ -0.06
Scrt1Q99M85 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scrt1Q99M85 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.67□□□□□ -0.06
Scrt1Q99M85 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Gm37025-201ENSMUST00000195159 829 ntBASIC14.67□□□□□ -0.06
Scrt1Q99M85 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Gm45328-201ENSMUST00000210942 917 ntBASIC14.67□□□□□ -0.06
Scrt1Q99M85 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.67□□□□□ -0.06
Scrt1Q99M85 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.67□□□□□ -0.06
Scrt1Q99M85 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scrt1Q99M85 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Gm11452-201ENSMUST00000122376 690 ntBASIC14.66□□□□□ -0.06
Scrt1Q99M85 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Gm27459-201ENSMUST00000184860 107 ntBASIC14.66□□□□□ -0.06
Scrt1Q99M85 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Actl10-202ENSMUST00000226583 1501 ntBASIC14.66□□□□□ -0.06
Scrt1Q99M85 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scrt1Q99M85 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scrt1Q99M85 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Mir8098-201ENSMUST00000184011 137 ntBASIC14.65□□□□□ -0.06
Scrt1Q99M85 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.65□□□□□ -0.06
Scrt1Q99M85 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scrt1Q99M85 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms