Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clp1Q99LI9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
Clp1Q99LI9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.66■□□□□ 0.42
Clp1Q99LI9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.66■□□□□ 0.42
Clp1Q99LI9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clp1Q99LI9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.65■□□□□ 0.42
Clp1Q99LI9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.65■□□□□ 0.42
Clp1Q99LI9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clp1Q99LI9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clp1Q99LI9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.64■□□□□ 0.42
Clp1Q99LI9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clp1Q99LI9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.64■□□□□ 0.41
Clp1Q99LI9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.64■□□□□ 0.41
Clp1Q99LI9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.64■□□□□ 0.41
Clp1Q99LI9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.64■□□□□ 0.41
Clp1Q99LI9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clp1Q99LI9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms