Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Chmp1aQ921W0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 AV356131-201ENSMUST00000206201 750 ntBASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp1aQ921W0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp1aQ921W0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm7290-201ENSMUST00000104990 617 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm12918-201ENSMUST00000120234 636 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm15710-201ENSMUST00000121821 636 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm5075-201ENSMUST00000196916 622 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Chmp1aQ921W0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Gm11643-201ENSMUST00000119578 864 ntBASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp1aQ921W0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp1aQ921W0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms