Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha8Q91Y12 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Dancr-204ENSMUST00000132389 2347 ntBASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Gm27463-201ENSMUST00000183569 57 ntBASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pcdha8Q91Y12 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Gm5417-201ENSMUST00000079706 384 ntBASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha8Q91Y12 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Gm37055-201ENSMUST00000191866 133 ntBASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha8Q91Y12 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha8Q91Y12 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms