Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhac1Q91Y10 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhac1Q91Y10 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhac1Q91Y10 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhac1Q91Y10 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Mir1199-201ENSMUST00000117015 119 ntBASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Gm13216-201ENSMUST00000117145 591 ntBASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhac1Q91Y10 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms