Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Gm12644-201ENSMUST00000119935 606 ntBASIC16.55■□□□□ 0.24
Vsx1Q91V10 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Mir5131-201ENSMUST00000175426 93 ntBASIC16.55■□□□□ 0.24
Vsx1Q91V10 Gm8000-201ENSMUST00000188378 592 ntBASIC16.55■□□□□ 0.24
Vsx1Q91V10 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.54■□□□□ 0.24
Vsx1Q91V10 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.54■□□□□ 0.24
Vsx1Q91V10 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.54■□□□□ 0.24
Vsx1Q91V10 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vsx1Q91V10 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vsx1Q91V10 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.52■□□□□ 0.24
Vsx1Q91V10 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Gm6296-201ENSMUST00000222599 943 ntBASIC16.52■□□□□ 0.24
Vsx1Q91V10 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vsx1Q91V10 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.52■□□□□ 0.23
Vsx1Q91V10 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vsx1Q91V10 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms