Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Gm12895-201ENSMUST00000122214 226 ntBASIC17.81■□□□□ 0.44
TraipQ8VIG6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Gm44430-201ENSMUST00000203376 995 ntBASIC17.81■□□□□ 0.44
TraipQ8VIG6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.81■□□□□ 0.44
TraipQ8VIG6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.81■□□□□ 0.44
TraipQ8VIG6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.81■□□□□ 0.44
TraipQ8VIG6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TraipQ8VIG6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Rprl3-201ENSMUST00000157400 290 ntBASIC17.79■□□□□ 0.44
TraipQ8VIG6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.79■□□□□ 0.44
TraipQ8VIG6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Gm34391-201ENSMUST00000203706 907 ntBASIC17.79■□□□□ 0.44
TraipQ8VIG6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TraipQ8VIG6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.78■□□□□ 0.44
TraipQ8VIG6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm10052-201ENSMUST00000168019 960 ntBASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.78■□□□□ 0.44
TraipQ8VIG6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Gm7729-201ENSMUST00000050143 801 ntBASIC17.78■□□□□ 0.44
TraipQ8VIG6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TraipQ8VIG6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.77■□□□□ 0.44
TraipQ8VIG6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TraipQ8VIG6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.77■□□□□ 0.43
TraipQ8VIG6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.77■□□□□ 0.43
TraipQ8VIG6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TraipQ8VIG6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms