Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rsph1Q8VIG3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rsph1Q8VIG3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.47■□□□□ 0.39
Rsph1Q8VIG3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rsph1Q8VIG3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rsph1Q8VIG3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rsph1Q8VIG3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.46■□□□□ 0.38
Rsph1Q8VIG3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Rsph1Q8VIG3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rsph1Q8VIG3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rsph1Q8VIG3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms