Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Gm13148-201ENSMUST00000118892 745 ntBASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.72□□□□□ -0.21
Nup35Q8R4R6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nup35Q8R4R6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nup35Q8R4R6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup35Q8R4R6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Gm4968-201ENSMUST00000071458 858 ntBASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms