Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacnb1Q8R3Z5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Gm36966-201ENSMUST00000192217 413 ntBASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Gm9731-201ENSMUST00000209480 747 ntBASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacnb1Q8R3Z5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Gm5970-201ENSMUST00000131638 1216 ntBASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Gm44830-201ENSMUST00000207667 584 ntBASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cacnb1Q8R3Z5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacnb1Q8R3Z5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm11539-201ENSMUST00000119837 557 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm14301-201ENSMUST00000120181 324 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm13436-201ENSMUST00000120418 567 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm27001-201ENSMUST00000182252 936 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm37709-201ENSMUST00000195074 600 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacnb1Q8R3Z5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacnb1Q8R3Z5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms