Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vmn1r28Q8R2C9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Gm21559-201ENSMUST00000220638 855 ntBASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Gm8587-201ENSMUST00000076538 843 ntBASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Actl10-202ENSMUST00000226583 1501 ntBASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vmn1r28Q8R2C9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Gm26039-201ENSMUST00000158152 144 ntBASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vmn1r28Q8R2C9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vmn1r28Q8R2C9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Vmn1r28Q8R2C9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms