Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Mir5133-201ENSMUST00000174955 77 ntBASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nudcd3Q8R1N4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Gm42569-201ENSMUST00000200539 472 ntBASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Gm4968-201ENSMUST00000071458 858 ntBASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nudcd3Q8R1N4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nudcd3Q8R1N4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nudcd3Q8R1N4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms