Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Gm8520-201ENSMUST00000186517 868 ntBASIC10.55□□□□□ -0.72
Cystm1Q8K353 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.55□□□□□ -0.72
Cystm1Q8K353 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cystm1Q8K353 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Nespas-201ENSMUST00000143738 1083 ntBASIC10.54□□□□□ -0.72
Cystm1Q8K353 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.54□□□□□ -0.72
Cystm1Q8K353 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cystm1Q8K353 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.53□□□□□ -0.72
Cystm1Q8K353 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Idnk-204ENSMUST00000226010 1898 ntBASIC10.53□□□□□ -0.72
Cystm1Q8K353 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.53□□□□□ -0.72
Cystm1Q8K353 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Cystm1Q8K353 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cystm1Q8K353 Gm26524-201ENSMUST00000192339 390 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms