Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Gm8000-201ENSMUST00000188378 592 ntBASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shtn1Q8K2Q9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Gm18421-201ENSMUST00000204122 625 ntBASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Shtn1Q8K2Q9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shtn1Q8K2Q9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Gm11779-201ENSMUST00000118541 368 ntBASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.7■□□□□ 0.74
Shtn1Q8K2Q9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Gm10060-201ENSMUST00000212002 111 ntBASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shtn1Q8K2Q9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shtn1Q8K2Q9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shtn1Q8K2Q9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shtn1Q8K2Q9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shtn1Q8K2Q9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shtn1Q8K2Q9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms