Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Phf7-203ENSMUST00000226565 1971 ntBASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtn1Q8K0T0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtn1Q8K0T0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn1Q8K0T0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn1Q8K0T0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn1Q8K0T0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtn1Q8K0T0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtn1Q8K0T0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtn1Q8K0T0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Gm26039-201ENSMUST00000158152 144 ntBASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Gm22697-201ENSMUST00000175194 63 ntBASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtn1Q8K0T0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms