Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Syne4Q8CII8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.96■□□□□ 0.63
Syne4Q8CII8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Syne4Q8CII8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.96■□□□□ 0.63
Syne4Q8CII8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Syne4Q8CII8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Syne4Q8CII8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Gm25745-201ENSMUST00000174945 133 ntBASIC18.95■□□□□ 0.62
Syne4Q8CII8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.95■□□□□ 0.62
Syne4Q8CII8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Syne4Q8CII8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.94■□□□□ 0.62
Syne4Q8CII8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Syne4Q8CII8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Syne4Q8CII8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Gm15467-201ENSMUST00000120582 445 ntBASIC18.92■□□□□ 0.62
Syne4Q8CII8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Psmb5-202ENSMUST00000227257 622 ntBASIC18.92■□□□□ 0.62
Syne4Q8CII8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Syne4Q8CII8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.91■□□□□ 0.62
Syne4Q8CII8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Gm27702-201ENSMUST00000184512 56 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms