Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc28aQ8CEI3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc28aQ8CEI3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc28aQ8CEI3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc28aQ8CEI3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc28aQ8CEI3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc28aQ8CEI3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms