Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Gm715-201ENSMUST00000117865 831 ntBASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Timm23-208ENSMUST00000226683 750 ntBASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb7Q8CDY9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb7Q8CDY9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb7Q8CDY9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb7Q8CDY9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb7Q8CDY9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb7Q8CDY9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhb7Q8CDY9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb7Q8CDY9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb7Q8CDY9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms