Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Gm20049-201ENSMUST00000219950 730 ntBASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nhlrc3Q8CCH2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Gm18666-201ENSMUST00000190039 958 ntBASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nhlrc3Q8CCH2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Gm43183-201ENSMUST00000200632 547 ntBASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.12□□□□□ -0.15
Nhlrc3Q8CCH2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Gm17661-201ENSMUST00000170317 270 ntBASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nhlrc3Q8CCH2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms