Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Gm2559-201ENSMUST00000201323 363 ntBASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc46a2Q8CA03 Dio3-201ENSMUST00000097228 1449 ntBASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc46a2Q8CA03 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Mir5133-201ENSMUST00000174955 77 ntBASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Slc46a2Q8CA03 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms