Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Gm20760-201ENSMUST00000179197 648 ntBASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Aph1bQ8C7N7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Aph1bQ8C7N7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Aph1bQ8C7N7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Aph1bQ8C7N7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gm18958-201ENSMUST00000174258 762 ntBASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Timm23-208ENSMUST00000226683 750 ntBASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Aph1bQ8C7N7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms