Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tsen54Q8C2A2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Gm4968-201ENSMUST00000071458 858 ntBASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.06□□□□□ -0.16
Tsen54Q8C2A2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Gm12441-201ENSMUST00000121806 588 ntBASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Gm26524-201ENSMUST00000192339 390 ntBASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Rab3c-203ENSMUST00000224180 967 ntBASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tsen54Q8C2A2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms