Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm10252-201ENSMUST00000209541 832 ntBASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trub1Q8C0D0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trub1Q8C0D0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trub1Q8C0D0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Gm13186-201ENSMUST00000118031 316 ntBASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Gm16061-201ENSMUST00000122167 857 ntBASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trub1Q8C0D0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trub1Q8C0D0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trub1Q8C0D0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trub1Q8C0D0 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.27■□□□□ 0.35
Trub1Q8C0D0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Trub1Q8C0D0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trub1Q8C0D0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trub1Q8C0D0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms