Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Gm27357-201ENSMUST00000183754 135 ntBASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ubr7Q8BU04 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr7Q8BU04 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ubr7Q8BU04 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Gm9103-201ENSMUST00000119371 405 ntBASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ubr7Q8BU04 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ubr7Q8BU04 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Gm17807-201ENSMUST00000186869 298 ntBASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ubr7Q8BU04 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms