Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne3Q8BT60 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Gm12085-201ENSMUST00000119263 940 ntBASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Gm37025-201ENSMUST00000195159 829 ntBASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne3Q8BT60 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Gm20760-201ENSMUST00000179197 648 ntBASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne3Q8BT60 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne3Q8BT60 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Gm13168-201ENSMUST00000121771 632 ntBASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.16■□□□□ 0.18
Cpne3Q8BT60 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cpne3Q8BT60 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms