Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.25■□□□□ 0.35
Suds3Q8BR65 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Timm23-208ENSMUST00000226683 750 ntBASIC17.24■□□□□ 0.35
Suds3Q8BR65 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Suds3Q8BR65 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.23■□□□□ 0.35
Suds3Q8BR65 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Gm13836-201ENSMUST00000121159 501 ntBASIC17.23■□□□□ 0.35
Suds3Q8BR65 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Suds3Q8BR65 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Suds3Q8BR65 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Gm43799-201ENSMUST00000201845 579 ntBASIC17.21■□□□□ 0.35
Suds3Q8BR65 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.21■□□□□ 0.35
Suds3Q8BR65 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Suds3Q8BR65 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Suds3Q8BR65 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.2■□□□□ 0.34
Suds3Q8BR65 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Gm9987-201ENSMUST00000069768 567 ntBASIC17.2■□□□□ 0.34
Suds3Q8BR65 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.2■□□□□ 0.34
Suds3Q8BR65 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms