Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.05■□□□□ 0.32
Sfr1Q8BP27 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.04■□□□□ 0.32
Sfr1Q8BP27 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sfr1Q8BP27 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sfr1Q8BP27 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.02■□□□□ 0.32
Sfr1Q8BP27 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Mir1668-201ENSMUST00000184114 107 ntBASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Gm7213-201ENSMUST00000215977 950 ntBASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sfr1Q8BP27 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sfr1Q8BP27 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sfr1Q8BP27 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms