Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf38Q8BI21 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf38Q8BI21 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf38Q8BI21 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf38Q8BI21 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Gm13168-201ENSMUST00000121771 632 ntBASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Gm8520-201ENSMUST00000186517 868 ntBASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf38Q8BI21 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf38Q8BI21 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.17■□□□□ 0.18
Rnf38Q8BI21 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Rnf38Q8BI21 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf38Q8BI21 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms