Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Depdc1bQ8BH88 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Depdc1bQ8BH88 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Gm17661-201ENSMUST00000170317 270 ntBASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Gm18959-201ENSMUST00000208954 655 ntBASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Depdc1bQ8BH88 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Depdc1bQ8BH88 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Depdc1bQ8BH88 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
Depdc1bQ8BH88 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Depdc1bQ8BH88 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms