Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim50Q810I2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim50Q810I2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim50Q810I2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim50Q810I2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim50Q810I2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim50Q810I2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.34■□□□□ 0.21
Trim50Q810I2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trim50Q810I2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim50Q810I2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim50Q810I2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim50Q810I2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim50Q810I2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim50Q810I2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Gm7370-201ENSMUST00000219471 767 ntBASIC16.33■□□□□ 0.2
Trim50Q810I2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.33■□□□□ 0.2
Trim50Q810I2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.33■□□□□ 0.2
Trim50Q810I2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim50Q810I2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim50Q810I2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim50Q810I2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim50Q810I2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim50Q810I2 Gm2274-201ENSMUST00000184539 609 ntBASIC16.32■□□□□ 0.2
Trim50Q810I2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim50Q810I2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.32■□□□□ 0.2
Trim50Q810I2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim50Q810I2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim50Q810I2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.31■□□□□ 0.2
Trim50Q810I2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim50Q810I2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim50Q810I2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms