Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Srrm3Q80WV7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Srrm3Q80WV7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Gm43799-201ENSMUST00000201845 579 ntBASIC17.47■□□□□ 0.39
Srrm3Q80WV7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Srrm3Q80WV7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Gm6433-201ENSMUST00000118634 875 ntBASIC17.46■□□□□ 0.39
Srrm3Q80WV7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Srrm3Q80WV7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Srrm3Q80WV7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Srrm3Q80WV7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms