Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Otop1Q80VM9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Otop1Q80VM9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.07■□□□□ 0.16
Otop1Q80VM9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Otop1Q80VM9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Otop1Q80VM9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Otop1Q80VM9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Otop1Q80VM9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Otop1Q80VM9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.05■□□□□ 0.16
Otop1Q80VM9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gm27525-201ENSMUST00000184465 107 ntBASIC16.05■□□□□ 0.16
Otop1Q80VM9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.05■□□□□ 0.16
Otop1Q80VM9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Otop1Q80VM9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.04■□□□□ 0.16
Otop1Q80VM9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Otop1Q80VM9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.03■□□□□ 0.16
Otop1Q80VM9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.03■□□□□ 0.16
Otop1Q80VM9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.03■□□□□ 0.16
Otop1Q80VM9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Otop1Q80VM9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Otop1Q80VM9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Otop1Q80VM9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Otop1Q80VM9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Otop1Q80VM9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms