Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ush1gQ80T11 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ush1gQ80T11 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ush1gQ80T11 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ush1gQ80T11 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ush1gQ80T11 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.32■□□□□ 0.52
Ush1gQ80T11 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ush1gQ80T11 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Gm6443-201ENSMUST00000203599 874 ntBASIC18.31■□□□□ 0.52
Ush1gQ80T11 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Birc2-201ENSMUST00000054878 378 ntBASIC18.31■□□□□ 0.52
Ush1gQ80T11 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ush1gQ80T11 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Gm27000-201ENSMUST00000182943 842 ntBASIC18.3■□□□□ 0.52
Ush1gQ80T11 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.3■□□□□ 0.52
Ush1gQ80T11 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.3■□□□□ 0.52
Ush1gQ80T11 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ush1gQ80T11 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Gm34391-201ENSMUST00000203706 907 ntBASIC18.29■□□□□ 0.52
Ush1gQ80T11 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.29■□□□□ 0.52
Ush1gQ80T11 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ush1gQ80T11 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Olfr129-201ENSMUST00000122318 993 ntBASIC18.28■□□□□ 0.52
Ush1gQ80T11 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Mir8098-201ENSMUST00000184011 137 ntBASIC18.28■□□□□ 0.52
Ush1gQ80T11 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.28■□□□□ 0.52
Ush1gQ80T11 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ush1gQ80T11 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ush1gQ80T11 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ush1gQ80T11 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms