Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Gm6576-201ENSMUST00000169678 883 ntBASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx4Q7TNK1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Gm6211-202ENSMUST00000167849 925 ntBASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Rfx4Q7TNK1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx4Q7TNK1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Gm10138-203ENSMUST00000206952 366 ntBASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx4Q7TNK1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfx4Q7TNK1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms