Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trpm4Q7TN37 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trpm4Q7TN37 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trpm4Q7TN37 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trpm4Q7TN37 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trpm4Q7TN37 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trpm4Q7TN37 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trpm4Q7TN37 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trpm4Q7TN37 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trpm4Q7TN37 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Gm14859-201ENSMUST00000117752 357 ntBASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trpm4Q7TN37 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Gm18101-201ENSMUST00000215769 548 ntBASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trpm4Q7TN37 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Gm42545-201ENSMUST00000202755 922 ntBASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trpm4Q7TN37 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trpm4Q7TN37 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms