Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga7Q6DD96 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga7Q6DD96 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Pcdhga7Q6DD96 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga7Q6DD96 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Gm12085-201ENSMUST00000119263 940 ntBASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga7Q6DD96 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga7Q6DD96 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms