Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ctnna3Q65CL1 Dancr-204ENSMUST00000132389 2347 ntBASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Ctnna3Q65CL1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ctnna3Q65CL1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.84■□□□□ 0.61
Ctnna3Q65CL1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ctnna3Q65CL1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Ctnna3Q65CL1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctnna3Q65CL1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctnna3Q65CL1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctnna3Q65CL1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Gm7638-201ENSMUST00000121348 967 ntBASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctnna3Q65CL1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctnna3Q65CL1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctnna3Q65CL1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctnna3Q65CL1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms