Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.3■□□□□ 0.84
Col11a2Q64739 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Col11a2Q64739 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.3■□□□□ 0.84
Col11a2Q64739 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col11a2Q64739 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.29■□□□□ 0.84
Col11a2Q64739 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.29■□□□□ 0.84
Col11a2Q64739 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col11a2Q64739 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Col11a2Q64739 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col11a2Q64739 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.28■□□□□ 0.84
Col11a2Q64739 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Col11a2Q64739 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.28■□□□□ 0.84
Col11a2Q64739 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Col11a2Q64739 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col11a2Q64739 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col11a2Q64739 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 Gm26308-201ENSMUST00000157768 69 ntBASIC20.27■□□□□ 0.84
Col11a2Q64739 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.27■□□□□ 0.84
Col11a2Q64739 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col11a2Q64739 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.27■□□□□ 0.84
Col11a2Q64739 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.83
Col11a2Q64739 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.27■□□□□ 0.83
Col11a2Q64739 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Col11a2Q64739 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.26■□□□□ 0.83
Col11a2Q64739 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.26■□□□□ 0.83
Col11a2Q64739 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col11a2Q64739 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.25■□□□□ 0.83
Col11a2Q64739 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.25■□□□□ 0.83
Col11a2Q64739 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.25■□□□□ 0.83
Col11a2Q64739 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Col11a2Q64739 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col11a2Q64739 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Gm9172-201ENSMUST00000212092 954 ntBASIC20.24■□□□□ 0.83
Col11a2Q64739 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.24■□□□□ 0.83
Col11a2Q64739 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col11a2Q64739 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col11a2Q64739 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col11a2Q64739 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col11a2Q64739 Gm27646-201ENSMUST00000183989 110 ntBASIC20.24■□□□□ 0.83
Col11a2Q64739 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.24■□□□□ 0.83
Col11a2Q64739 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col11a2Q64739 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.23■□□□□ 0.83
Col11a2Q64739 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.23■□□□□ 0.83
Col11a2Q64739 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.23■□□□□ 0.83
Col11a2Q64739 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col11a2Q64739 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms