Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp13a4Q5XF90 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Gm13186-201ENSMUST00000118031 316 ntBASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp13a4Q5XF90 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Gm13216-201ENSMUST00000117145 591 ntBASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp13a4Q5XF90 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atp13a4Q5XF90 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp13a4Q5XF90 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms