Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr3Q5U430 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.33■□□□□ 0.84
Ubr3Q5U430 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr3Q5U430 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Ubr3Q5U430 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr3Q5U430 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr3Q5U430 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.31■□□□□ 0.84
Ubr3Q5U430 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.3■□□□□ 0.84
Ubr3Q5U430 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Gm11764-201ENSMUST00000120221 623 ntBASIC20.3■□□□□ 0.84
Ubr3Q5U430 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.3■□□□□ 0.84
Ubr3Q5U430 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ubr3Q5U430 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.29■□□□□ 0.84
Ubr3Q5U430 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ubr3Q5U430 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Gm27646-201ENSMUST00000183989 110 ntBASIC20.28■□□□□ 0.84
Ubr3Q5U430 Mir8117-201ENSMUST00000184773 107 ntBASIC20.28■□□□□ 0.84
Ubr3Q5U430 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubr3Q5U430 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubr3Q5U430 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ubr3Q5U430 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubr3Q5U430 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm26308-201ENSMUST00000157768 69 ntBASIC20.26■□□□□ 0.83
Ubr3Q5U430 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.26■□□□□ 0.83
Ubr3Q5U430 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms