Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Gm37292-201ENSMUST00000192062 758 ntBASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7d-3Q5R1I1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Gm10517-202ENSMUST00000192970 758 ntBASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Trmt13-210ENSMUST00000198454 880 ntBASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.35□□□□□ -0.43
Trav7d-3Q5R1I1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7d-3Q5R1I1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav7d-3Q5R1I1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7d-3Q5R1I1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms