Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav8d-1Q5R1H8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Gm2399-201ENSMUST00000104944 225 ntBASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8d-1Q5R1H8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Trav8d-1Q5R1H8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Gm20760-201ENSMUST00000179197 648 ntBASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8d-1Q5R1H8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms