Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm25649-201ENSMUST00000178476 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm25548-201ENSMUST00000178681 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm23147-201ENSMUST00000178841 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm26095-201ENSMUST00000179270 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm22171-201ENSMUST00000179283 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm23936-201ENSMUST00000179354 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm22619-201ENSMUST00000179516 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm25255-201ENSMUST00000179579 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm24755-201ENSMUST00000179691 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm26506-201ENSMUST00000179692 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm25086-201ENSMUST00000179931 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm23243-201ENSMUST00000180047 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm24659-201ENSMUST00000180212 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm24169-201ENSMUST00000180244 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm23689-201ENSMUST00000180354 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm27359-201ENSMUST00000184153 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm27785-201ENSMUST00000184268 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm27466-201ENSMUST00000184396 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Gm27703-201ENSMUST00000184836 110 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Mir3102-201ENSMUST00000175555 104 ntBASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Herc2Q4U2R1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Gm12490-201ENSMUST00000120255 560 ntBASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 AC124603.1-201ENSMUST00000223843 308 ntBASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC9.96□□□□□ -0.82
Herc2Q4U2R1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Gm27618-201ENSMUST00000183671 60 ntBASIC9.95□□□□□ -0.82
Herc2Q4U2R1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Herc2Q4U2R1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Herc2Q4U2R1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Herc2Q4U2R1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms