Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cks1brtQ3UNC9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1brtQ3UNC9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Cks1brtQ3UNC9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cks1brtQ3UNC9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1brtQ3UNC9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1brtQ3UNC9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cks1brtQ3UNC9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms