Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col19a1Q0VF58 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Gm4459-201ENSMUST00000118750 468 ntBASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Gm44872-201ENSMUST00000207864 420 ntBASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col19a1Q0VF58 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col19a1Q0VF58 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Gm7222-201ENSMUST00000117512 906 ntBASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.85■□□□□ 0.45
Col19a1Q0VF58 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col19a1Q0VF58 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Mir8117-201ENSMUST00000184773 107 ntBASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col19a1Q0VF58 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col19a1Q0VF58 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Col19a1Q0VF58 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col19a1Q0VF58 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms