Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ebf1Q07802 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.95■□□□□ 0.3
Ebf1Q07802 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.95■□□□□ 0.3
Ebf1Q07802 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.95■□□□□ 0.3
Ebf1Q07802 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ebf1Q07802 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ebf1Q07802 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ebf1Q07802 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.94■□□□□ 0.3
Ebf1Q07802 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.94■□□□□ 0.3
Ebf1Q07802 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ebf1Q07802 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.93■□□□□ 0.3
Ebf1Q07802 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ebf1Q07802 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ebf1Q07802 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ebf1Q07802 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ebf1Q07802 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Gm15794-201ENSMUST00000120182 631 ntBASIC16.91■□□□□ 0.3
Ebf1Q07802 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Gm28659-201ENSMUST00000188013 759 ntBASIC16.91■□□□□ 0.3
Ebf1Q07802 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ebf1Q07802 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ebf1Q07802 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.9■□□□□ 0.3
Ebf1Q07802 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ebf1Q07802 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms