Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smn1P97801 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Smn1P97801 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.42□□□□□ -0.1
Smn1P97801 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.42□□□□□ -0.1
Smn1P97801 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.42□□□□□ -0.1
Smn1P97801 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.42□□□□□ -0.1
Smn1P97801 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Smn1P97801 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smn1P97801 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smn1P97801 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.41□□□□□ -0.1
Smn1P97801 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smn1P97801 Gm2559-201ENSMUST00000201323 363 ntBASIC14.41□□□□□ -0.1
Smn1P97801 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smn1P97801 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smn1P97801 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smn1P97801 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.4□□□□□ -0.1
Smn1P97801 Gm5408-201ENSMUST00000197998 747 ntBASIC14.4□□□□□ -0.1
Smn1P97801 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.4□□□□□ -0.1
Smn1P97801 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.4□□□□□ -0.1
Smn1P97801 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smn1P97801 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Smn1P97801 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Smn1P97801 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.4□□□□□ -0.11
Smn1P97801 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Smn1P97801 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Smn1P97801 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.39□□□□□ -0.11
Smn1P97801 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.39□□□□□ -0.11
Smn1P97801 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smn1P97801 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms