Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CiitaP79621 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.19■□□□□ 0.5
CiitaP79621 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CiitaP79621 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CiitaP79621 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.19■□□□□ 0.5
CiitaP79621 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CiitaP79621 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CiitaP79621 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CiitaP79621 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CiitaP79621 Gm9103-201ENSMUST00000119371 405 ntBASIC18.18■□□□□ 0.5
CiitaP79621 Olfr129-201ENSMUST00000122318 993 ntBASIC18.18■□□□□ 0.5
CiitaP79621 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.18■□□□□ 0.5
CiitaP79621 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.18■□□□□ 0.5
CiitaP79621 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CiitaP79621 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CiitaP79621 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CiitaP79621 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CiitaP79621 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Gm27357-201ENSMUST00000183754 135 ntBASIC18.17■□□□□ 0.5
CiitaP79621 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.17■□□□□ 0.5
CiitaP79621 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.17■□□□□ 0.5
CiitaP79621 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CiitaP79621 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.17■□□□□ 0.5
CiitaP79621 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CiitaP79621 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CiitaP79621 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.16■□□□□ 0.5
CiitaP79621 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.16■□□□□ 0.5
CiitaP79621 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.16■□□□□ 0.5
CiitaP79621 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.16■□□□□ 0.5
CiitaP79621 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CiitaP79621 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.15■□□□□ 0.5
CiitaP79621 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CiitaP79621 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.15■□□□□ 0.5
CiitaP79621 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.15■□□□□ 0.5
CiitaP79621 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CiitaP79621 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CiitaP79621 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CiitaP79621 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CiitaP79621 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CiitaP79621 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CiitaP79621 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.14■□□□□ 0.49
CiitaP79621 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CiitaP79621 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.14■□□□□ 0.49
CiitaP79621 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.14■□□□□ 0.49
CiitaP79621 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.14■□□□□ 0.49
CiitaP79621 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.14■□□□□ 0.49
CiitaP79621 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CiitaP79621 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CiitaP79621 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CiitaP79621 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CiitaP79621 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms