Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.64■□□□□ 0.25
Crnkl1P63154 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.64■□□□□ 0.25
Crnkl1P63154 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Crnkl1P63154 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Crnkl1P63154 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.64■□□□□ 0.25
Crnkl1P63154 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Crnkl1P63154 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.63■□□□□ 0.25
Crnkl1P63154 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Crnkl1P63154 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Crnkl1P63154 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.62■□□□□ 0.25
Crnkl1P63154 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.62■□□□□ 0.25
Crnkl1P63154 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Crnkl1P63154 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.62■□□□□ 0.25
Crnkl1P63154 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Crnkl1P63154 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Crnkl1P63154 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.62■□□□□ 0.25
Crnkl1P63154 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Crnkl1P63154 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.61■□□□□ 0.25
Crnkl1P63154 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Crnkl1P63154 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.61■□□□□ 0.25
Crnkl1P63154 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.6■□□□□ 0.25
Crnkl1P63154 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Crnkl1P63154 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms