Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.01□□□□□ -0.49
Rpl39P62892 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39P62892 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39P62892 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rpl39P62892 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpl39P62892 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Rpl39P62892 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Rpl39P62892 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rpl39P62892 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12□□□□□ -0.49
Rpl39P62892 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rpl39P62892 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12□□□□□ -0.49
Rpl39P62892 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12□□□□□ -0.49
Rpl39P62892 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12□□□□□ -0.49
Rpl39P62892 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Gm6365-201ENSMUST00000054711 744 ntBASIC12□□□□□ -0.49
Rpl39P62892 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rpl39P62892 Flg-201ENSMUST00000050758 1488 ntBASIC12□□□□□ -0.49
Rpl39P62892 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rpl39P62892 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rpl39P62892 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.99□□□□□ -0.49
Rpl39P62892 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.99□□□□□ -0.49
Rpl39P62892 Gm10033-202ENSMUST00000211874 928 ntBASIC11.99□□□□□ -0.49
Rpl39P62892 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rpl39P62892 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.99□□□□□ -0.49
Rpl39P62892 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Rpl39P62892 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rpl39P62892 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rpl39P62892 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rpl39P62892 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Rpl39P62892 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rpl39P62892 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rpl39P62892 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms